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GENE-APL6 3.5” Subcompact Board User’s Manual 3 Last Updated: June 13, 2019...
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Copyright Notice This document is copyrighted, 2019. All rights are reserved. The original manufacturer reserves the right to make improvements to the products described in this manual at any time without notice. No part of this manual may be reproduced, copied, translated, or transmitted in any form or by any means without the prior written permission of the original manufacturer.
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Acknowledgement All other products’ name or trademarks are properties of their respective owners. Microsoft Windows is a registered trademark of Microsoft Corp. Intel, Pentium, Celeron, and Xeon are registered trademarks of Intel Corporation Core, Atom are trademarks of Intel Corporation ...
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Packing List Before setting up your product, please make sure the following items have been shipped: Item Quantity GENE-APL6 with heat spreader If any of these items are missing or damaged, please contact your distributor or sales representative immediately. Preface...
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About this Document This User’s Manual contains all the essential information, such as detailed descriptions and explanations on the product’s hardware and software features (if any), its specifications, dimensions, jumper/connector settings/definitions, and driver installation instructions (if any), to facilitate users in setting up their product. Users may refer to the AAEON.com for the latest version of this document.
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Safety Precautions Please read the following safety instructions carefully. It is advised that you keep this manual for future references All cautions and warnings on the device should be noted. Make sure the power source matches the power rating of the device. Position the power cord so that people cannot step on it.
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If any of the following situations arises, please the contact our service personnel: Damaged power cord or plug Liquid intrusion to the device iii. Exposure to moisture Device is not working as expected or in a manner as described in this manual The device is dropped or damaged Any obvious signs of damage displayed on the device...
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FCC Statement This device complies with Part 15 FCC Rules. Operation is subject to the following two conditions: (1) this device may not cause harmful interference, and (2) this device must accept any interference received including interference that may cause undesired operation.
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China RoHS Requirement (EN) Poisonous or Hazardous Substances or Elements in Products AAEON Main Board/ Daughter Board/ Backplane Poisonous or Hazardous Substances or Elements Hexavalent Polybrominated Polybrominated Component Lead Mercury Cadmium Chromium Biphenyls Diphenyl Ethers (Pb) (Hg) (Cd) (Cr(VI)) (PBB) (PBDE) PCB &...
Specifications System 3.5'' SubCompact Board Form Factor Intel® Pentium® N4200/ Celeron® N3350 Processor SoC up to 2.5GHz CPU Frequency Intel® Pentium® N4200/ Celeron® N3350 Chipset Processor SoC DDR3L 1866MHz, SODIMM x 1 Memory Type Up to 8GB Max. Memory Capacity UEFI BIOS Wake on LAN...
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System CE/FCC Certification Intel® i210/I211, 10/100/1000Base-TX, RJ-45 x 2 Ethernet High Definition Audio Interface Audio USB 3.0 x 2 USB Port USB 2.0 x 2 RS-232 x 2 , RS-232/422/485 x 2 Serial Port SPP/EPP/ECP x 1 (Option, Shared with DIO) Parallel Port SATA 3.0 x 1 HDD Interface...
List of Jumpers Please refer to the table below for all of the board’s jumpers that you can configure for your application Label Function Front Panel Connector COM2 Pin8 Function Selection COM3 Pin8 Function Selection LVDS Port2 Backlight Lightness Control Mode Selection LVDS Port2 Backlight Inverter VCC Selection and Operating VDD Selection LVDS Port1 Backlight Inverter VCC Selection...
2.4.7 LVDS Port1 Backlight Lightness Control Mode Selection (JP7) VR Mode (Default) PWM Mode 2.4.8 Auto Power Button Enable/Disable Selection (JP8) 1 2 3 Disable/ATX Enable/AT (Default) ※ When disabled, the power button of JP5 (1-2) will be used to power on the system 2.4.9 Touch Screen 4,5,8 Wire Selection (JP9) 4/8 Wires Mode (Default) 5 Wires Mode...
List of Connectors Please refer to the table below for all of the board’s connectors that you can configure for your application Label Function External +5VSB Input +5V Output for SATA HDD External Power Input SATA Port CPU FAN (Optional) Audio I/O Port Mini-Card Slot (Full-Size) COM Port 2...
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Label Function CN24 LAN (RJ-45) Port2 CN25 COM Port 1 (Wafer, Optional) CN26 USB3.0 Port 0 / Port 1 CN27 COM Port 1(D-SUB 9) CN28 Battery CONN CN29 HDMI CONN CN30 VGA Port DIMM1 DDR3L SO-DIMM Slot Chapter 2 – Hardware Information...
2.5.1 External +5VSB Input (CN1) PS_ON# +5VSB Pin Name Signal Type Signal level PS_ON# +5VSB ※ Since every power supply discharge design is different, we recommend restarting 3 seconds after powering off to make sure ATX power is fully discharged. Or, make sure 5V standby power has been discharged under 2V. 2.5.2 +5V Output for SATA HDD (CN2) Pin Name Signal Type...
2.5.3 External Power Input (CN3) Pin Name Signal Type Signal Level +VIN 9V~36V or 12V ※There are two types of power input, 9V~36V or 12V only, by BOM Change 2.5.4 SATA Port (CN4) Pin 1 Pin 7 Pin Name Signal Type Signal Level SATA_TX+ DIFF...
Pin Name Signal Type Signal Level FAN_POWER +12V FAN_TAC 2.5.6 Audio I/O Port (CN6) MIC_L MIC_R GND_AUDIO LINE_L_IN LINE_R_IN GND_AUDIO LEFT_OUT GND_AUDIO RIGHT_OUT +5V_AUDIO Pin Name Signal Type Signal Level MIC_L MIC_R GND_AUDIO LINE_L_IN LINE_R_IN GND_AUDIO Chapter 2 – Hardware Information...
Pin Name Signal Type Signal Level USB_D+ DIFF +3.3VSB +3.3V +3.3VSB +3.3V +1.5V +1.5V +3.3VSB +3.3V 2.5.8 COM Port 2 (CN8) Chapter 2 – Hardware Information...
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RS232 Pin Name Signal Type Signal Level DCD2 DSR2 RTS2 ±5V ±5V CTS2 DTR2 ±5V RI2/+5V/+12V +5V/+12V Chapter 2 – Hardware Information...
RS485 Pin Name Signal Type Signal Level RS485_ D2- ±5V RS485_D2+ ±5V NC/+5V/+12V +5V/+12V RS422 Pin Name Signal Type Signal Level RS422_TX2- ±5V RS422_TX2+ ±5V RS422_RX2+ RS422_RX2- NC/+5V/+12V +5V/+12V ※ COM2 RS-232/422/485 can be set by BIOS setting. Default is RS-232. ※...
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RS232 Pin Name Signal Type Signal Level DCD3 DSR3 RTS3 ±5V ±5V CTS3 DTR3 ±5V RI2/+5V/+12V +5V/+12V Chapter 2 – Hardware Information...
RS485 Pin Name Signal Type Signal Level RS485_ D3- ±5V RS485_D3+ ±5V NC/+5V/+12V +5V/+12V RS422 Pin Name Signal Type Signal Level RS422_TX3- ±5V RS422_TX3+ ±5V RS422_RX3+ RS422_RX3- NC/+5V/+12V +5V/+12V ※ COM3 RS-232/422/485 can be set by BIOS setting. Default is RS-232 ※...
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Pin Name Signal Type Signal Level DCD4 DSR4 RTS4 ±9V ±9V CTS4 DTR4 ±9V Chapter 2 – Hardware Information...
SMB_DATA/I2C_SDA SMB_CLK/I2C_CLK +3.3V SMB_ALERT/SERIRQ 2.5.13 LVDS Port2 (CN13) ※ LVDS LCD_PWR2 can be set to +3.3V or +5V by JP5 Pin Name Signal Type Signal Level BKL_ENABLE2 BKL_CONTROL2 LCD_PWR2 +3.3V/+5V LVDS2_A_CLK- DIFF Chapter 2 – Hardware Information...
2.5.16 LPT Port or Digital I/O Port (CN16) AFD# STROBE# ERROR# PRINT# SLIN# ACK# BUSY SLCT ※ LPT or Digital I/O function can be selected by BIOS setting. Default is LPT port LPT Port Pin Name Signal Type Signal Level STROBE# AFD# ERROR#...
DIO7 2.5.17 LVDS Port2 Inverter / Backlight Connector (CN17) Pin Name Signal Type Signal Level BKL_PWR +5V / +12V BKL_CONTROL BKL_ENABLE ※ LVDS2 BKL_PWR can be set to +5V or +12V by JP5 ※ LVDS2 BKL_CONTROL can be set by JP4 2.5.18 LVDS Port1 (CN18) Chapter 2 –...
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※ LVDS1 LCD_PWR can be set to +3.3V or +5V by JP1. Pin Name Signal Type Signal Level BKL_ENABLE BKL_CONTROL LCD_PWR +3.3V/+5V LVDS_A_CLK- DIFF LVDS_A_CLK+ DIFF LCD_PWR +3.3V/+5V LVDS_DA0- DIFF LVDS_DA0+ DIFF LVDS_DA1- DIFF LVDS_DA1+ DIFF Chapter 2 – Hardware Information...
2.5.20 USB 2.0 Port 5 (CN20) Pin Name Signal Type Signal Level +5VSB USB_D- DIFF USB_D+ DIFF 2.5.21 LVDS Port1 Inverter / Backlight Connector (CN21) Pin Name Signal Type Signal Level BKL_PWR +5V / +12V BKL_CONTROL Chapter 2 – Hardware Information...
Pin Name Signal Type Signal Level BKL_ENABLE ※ LVDS1 BKL_PWR can be set to +5V or +12V by JP6 ※ LVDS1 BKL_CONTROL can be set by JP7 2.5.22 Touch Screen Connector (Optional) (CN22) 8-Wire Pin Name Signal Type Signal Level TOP EXCITE BOTTOM EXCITE LEFT EXCITE...
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LEFT SENSE RIGHT SENSE 4-Wire Pin Name Signal Type Signal Level BOTTOM LEFT RIGHT Chapter 2 – Hardware Information...
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5-Wire Pin Name Signal Type Signal Level UL(Y) UR(H) LL(L) LR(X) SENSE(S) ※ Touch mode can be set by BIOS setting Chapter 2 – Hardware Information...
2.5.28 Battery CONN (CN28) Pin Name Signal Type Signal level 3.3V +3.3V 2.5.29 HDMI (CN29) Pin Name Signal Type Signal level HDMI_TX2+ DIFF HDMI_TX2- DIFF HDMI_TX1+ DIFF HDMI_TX1- DIFF HDMI_TX0+ DIFF Chapter 2 – Hardware Information...
HDMI_TX0- DIFF HDMI_CLK+ DIFF HDMI_CLK- DIFF DDC_CLK DDC_DATA HDMI_HPD 2.5.30 VGA Port (CN30) Pin Name Signal Type Signal level GREEN BLUE RED_GND_RTN GREEN_GND_RTN BLUE_GND_RTN Chapter 2 – Hardware Information...
System Test and Initialization The board uses certain routines to perform testing and initialization. If an error, fatal or non-fatal, is encountered, a few short beeps or an error message will be outputted. The board can usually continue the boot up sequence with non-fatal errors. The system configuration verification routines check the current system configuration against the values stored in the CMOS memory.
AMI BIOS Setup The AMI BIOS ROM has a pre-installed Setup program that allows users to modify basic system configurations, which is stored in the battery-backed CMOS RAM and BIOS NVRAM so that the information is retained when the power is turned off. To enter BIOS Setup, press <Del>...
3.4.1 Advanced: Trusted Computing Options summary: Security Device Disable Support Enable Optimal Default, Failsafe Default Enables or Disables BIOS support for security device. O.S. will not show Security Device. TCG EFI protocol and INT1A interface will not be available. SHA-1 PCR Bank Disable Enable Optimal Default, Failsafe Default...
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Pending Operation None Optimal Default, Failsafe Default TPM Clear Schedule an Operation for the Security Device. NOTE: Your Computer will reboot during restart in order to change State of Security Device. Platform Hierarchy Disabled Enabled Optimal Default, Failsafe Default Enable or disable Platform Hierarchy Storage Hierarchy Disabled Enabled...
3.4.3 Advanced: SATA Configuration Options summary: Chipset SATA Disabled Enabled Optimal Default, Failsafe Default Enables or Disables the Chipset SATA Controller. The Chipset SATA controller supports the 2 black internal SATA ports (up to 3Gb/s supported per port). Port 0 Disabled Enabled Optimal Default, Failsafe Default...
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Port 1 Disabled Enabled Optimal Default, Failsafe Default Enable or Disable SATA Port SATA Port 1 Hot Plug Disabled Optimal Default, Failsafe Default Capability Enabled If enabled, SATA port will be reported as Hot Plug capable. Chapter 3 – AMI BIOS Setup...
3.4.6.1Hardware Monitor: CPU Smart Fan Mode Configuration Options summary: Fan 1 Smart Fan Manual Duty Mode Control Auto Duty-Cycle Mode Optimal Default, Failsafe Default Smart Fan Mode Select Temperature Source CPU(external) Optimal Default, Failsafe Default System Select the monitored temperature source for this fan. Duty Cycle 1 Temperature 1 Auto fan speed control.
3.4.7.1 SIO Configuration: Serial Port 1 Configuration Options summary: Use This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Possible: Use Automatic Settings Optimal Default, Failsafe Default IO=3F8h; IRQ=4 IO=2F8h; IRQ=3 Allows user to change Device's Resource settings. New settings will be reflected on This Setup Page after System restarts.
3.4.7.2 SIO Configuration: Serial Port 2 Configuration Options summary: Use This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Possible: Use Automatic Settings Optimal Default, Failsafe Default IO=2F8h; IRQ=3 IO=3F8h; IRQ=4 Allows user to change Device's Resource settings. New settings will be reflected on This Setup Page after System restarts.
3.4.7.3 SIO Configuration: Serial Port 3 Configuration Options summary: Use This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Possible: Use Automatic Settings Optimal Default, Failsafe Default IO=3E8h; IRQ=11 IO=2E8h; IRQ=11 Allows user to change Device's Resource settings. New settings will be reflected on This Setup Page after System restarts.
3.4.7.4 SIO Configuration: Serial Port 4 Configuration Options summary: Use This Device Disable Enable Optimal Default, Failsafe Default Enable or Disable this Logical Device. Possible: Use Automatic Settings Optimal Default, Failsafe Default IO=2E8h; IRQ=10 IO=3E8h; IRQ=10 Allows user to change Device's Resource settings. New settings will be reflected on This Setup Page after System restarts.
3.4.7.5 SIO Configuration: Parallel Port Configuration Options summary: Use This Device Disable Optimal Default, Failsafe Default Enable Enable or Disable this Logical Device. Chapter 3 – AMI BIOS Setup...
3.4.8 Advanced: Power Management Options summary: Power Mode ATX Type Optimal Default, Failsafe Default AT Type Select system power mode Power Saving(ERP) Disabled Optimal Default, Failsafe Default Control Enabled Configure power mode for power saving function. Restore AC Power Last State Optimal Default, Failsafe Default Loss Always On...
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from S5 Fixed Time Select system power mode Chapter 3 – AMI BIOS Setup...
3.4.9 Advanced: Digital IO Port Configuration Options summary: DIO Port* Output Input Set DIO as Input or Output Output Level High Optimal Default, Failsafe Default Set output level when DIO pin is output Chapter 3 – AMI BIOS Setup...
3.5.1.1 North Bridge: LVDS Panel Configuration(LVDS2 only available for 2 LVDS Sku) Options summary: LVDS Disabled Enabled Optimal Default, Failsafe Default Enable/Disabled this panel. LVDS Panel Type 640x480@60Hz 800x480@60Hz 800x600@60Hz 1024x600@60Hz 1024x768@60Hz Optimal Default, Failsafe Default 1280x768@60Hz 1280x800@60Hz Chapter 3 – AMI BIOS Setup...
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1280x1024@60Hz 1366x768@60Hz 1440x900@60Hz 1600x1200@60Hz 1920x1080@60Hz 1920x1200@60Hz Select LCD panel used by Internal Graphics Device by selecting the appropriate setup item. Color Depth 18-bit Optimal Default, Failsafe Default 24-bit 36-bit 48-bit Select panel type Backlight Type Normal Optimal Default, Failsafe Default Inverted Select backlight control signal type Backlight Level...
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Select backlight control level Backlight PWM Freq 100Hz 200Hz 220Hz Optimal Default, Failsafe Default 500Hz 1KHz 2.2KHz 6.5KHz Select PWM frequency of backlight control signal Chapter 3 – AMI BIOS Setup...
Setup submenu: Security Change User/Supervisor Password You can install a Supervisor password, and if you install a supervisor password, you can then install a user password. A user password does not provide access to many of the features in the Setup utility. If you highlight these items and press Enter, a dialog box appears which lets you enter a password.
Driver Download/Installation Drivers for the GENE-APL6 can be downloaded from the product page on the AAEON website by following this link: https://www.aaeon.com/en/p/embedded-single-board-computers-gene-apl6 Download the driver(s) you need and follow the steps below to install them. Step 1 – Install Chipset Drivers Open the Step1 - Chipset folder followed by SetupChipset.exe Follow the instructions Drivers will be installed automatically...
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Step 5 – Install TXE Driver Open the Step5 - TXE folder followed by SetupTXE.exe Follow the instructions Drivers will be installed automatically Step 6 – Install Touch Driver Open the Step6 - Touch folder followed by Setup.exe Follow the instructions Drivers will be installed automatically Step 7 –...
List of Mating Connectors and Cables Mating Connector Connector Available Function Cable P/N Label Cable Vendor Model no External +5VSB Power Input PHR-3 ATX Cable 170220020B PS_ON# +5Vout 2 Pins For PHR-2 1702150155 Connector HDD Power +9~24V Vin Power 1702002010 Connector Cable SATA...
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LVDS DF13-30DS- CN13 HIROSE Connector 1.25C Digital I/O CN16 Neltron 2026B-10 Connector LVDS CN17 Inverter PHR-5 Connector LVDS DF13-30DS- CN18 HIROSE Connector 1.25C USB Port USB Wafer CN19 Molex 51021-0500 1700050207 Connector Cable USB Port USB Wafer CN20 Molex 51021-0500 1700050207 Connector Cable...